Microbiomics and Culturomics Core Facility

Publications

2024

9. KD Hyde et al. (560 authors). The 2024 Outline of Fungi and fungus-like taxa. Mycosphere 15:5146–6239.

8. EE England, CJ Pratt, MS Elshahed, and NH Youssef. Evaluating the impact of redox potential on the growth capacity of anaerobic gut fungi. FEMS Microbes. 5:5:xtae033.

7. NN Wijayawardene et al (109 authors). Classes and phyla of the kingdom Fungi. Fungal Diversity 128:1-165.

6. WA Eraqi, WA El-Sabbagh, RK Aziz, MS Elshahed, NH Youssef, NM Elkenawy. Gastroprotective and gut microbiome-modulating effects of ubiquinol in a rat model for gamma radiation-induced enteropathy. Animal Mirobiome 6:40.

5. CJ Pratt, CH Meili, AL Jones, DK Jackson, EE England, Y Wang, S Hartson, J Rogers, MS Elshahed, and NH Youssef. Anaerobic fungi in the tortoise alimentary tract illuminate early stages of host-fungal symbiosis and Neocallimastigomycota evolution. Nature comm. 15:2714.

4. SA Mulay, CR Hahn, DM Klingeman, MS Elshahed, NH Youssef, and M Podar.

Metagenomic sequencing of a Patescibacteria-containing enrichment from Zodletone spring in Oklahoma, USA. Microb. Res. Announc. 13:e00114-24.

3. CH Meili, MA TagElDein, AL Jones, CD Moon, C Andrews, MR Kirk, PH Janssen, CJ Yeoman, S Grace, J-L C. Borgogna, AP Foote,YI Nagy, MT Kashef, AS Yassin, MS Elshahed, NH Youssef. Diversity and community structure of anaerobic gut fungi in the rumen of wild and domesticated herbivores. Appl Environ Microbiol e0149223.

2. AL Jones, CJ Pratt, CH Meili, RM Soo, P Hugenholtz, MS Elshahed, and NH Youssef. Anaerobic gut fungal communities in marsupial hosts. mBio. 15:e0337023.

1. M Salah, MH Baky, N Ezzelarab, P. Shao, MS Elshahed, and M. Farag. Insoluble dietary fibers (IDFs): Structure, metabolism, interactions with human microbiome, and role in gut homeostasis. Crit Rev. F. Sci. nutr. 64:7, 1954-19685.